A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6993254



Internal ID10363343
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:88678065..88700842hg38UCSC Ensembl
Innerchr8:89690294..89713071hg19UCSC Ensembl
Innerchr8:89759410..89782187hg18UCSC Ensembl
Cytoband8q21.3
Allele length
AssemblyAllele length
hg3822778
hg1922778
hg1822778
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2764107
Supporting Variants
SamplesSW_1070
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6993254
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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