A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6993176



Internal ID10357669
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:54771824..55095548hg38UCSC Ensembl
Innerchr8:55684384..56008108hg19UCSC Ensembl
Innerchr8:55846938..56170662hg18UCSC Ensembl
Cytoband8q12.1
Allele length
AssemblyAllele length
hg38323725
hg19323725
hg18323725
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2764096
Supporting Variants
SamplesSW_0621
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6993176
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer