A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6992930



Internal ID10359190
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:39368221..39403478hg38UCSC Ensembl
Innerchr8:39225740..39260997hg19UCSC Ensembl
Innerchr8:39344897..39380154hg18UCSC Ensembl
Cytoband8p11.22
Allele length
AssemblyAllele length
hg3835258
hg1935258
hg1835258
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2764074
Supporting Variants
SamplesSW_0758
Known GenesADAM5
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6992930
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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