A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6992751



Internal ID10365843
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:15565761..15576174hg38UCSC Ensembl
Innerchr8:15423270..15433683hg19UCSC Ensembl
Innerchr8:15467641..15478054hg18UCSC Ensembl
Cytoband8p22
Allele length
AssemblyAllele length
hg3810414
hg1910414
hg1810414
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2764099
Supporting Variants
SamplesSW_1156
Known GenesTUSC3
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6992751
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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