A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6992008



Internal ID10371483
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr8:2183328..2237203hg38UCSC Ensembl
Innerchr8:2131525..2184964hg19UCSC Ensembl
Innerchr8:2118932..2172371hg18UCSC Ensembl
Cytoband8p23.3
Allele length
AssemblyAllele length
hg3853876
hg1953440
hg1853440
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2764106
Supporting Variants
SamplesSW_1406
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6992008
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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