A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6991059



Internal ID10357250
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:109797035..109813925hg38UCSC Ensembl
Innerchr7:109437092..109453982hg19UCSC Ensembl
Innerchr7:109224328..109241218hg18UCSC Ensembl
Cytoband7q31.1
Allele length
AssemblyAllele length
hg3816891
hg1916891
hg1816891
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2764022
Supporting Variants
SamplesSW_0592
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6991059
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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