A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6990960



Internal ID10361788
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:97588228..97603872hg38UCSC Ensembl
Innerchr7:97217540..97233184hg19UCSC Ensembl
Innerchr7:97055476..97071120hg18UCSC Ensembl
Cytoband7q21.3
Allele length
AssemblyAllele length
hg3815645
hg1915645
hg1815645
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2764023
Supporting Variants
SamplesSW_1008
Known Genes
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6990960
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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