A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6990907



Internal ID10019316
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:76568113..76801608hg38UCSC Ensembl
Innerchr7:76197430..76430925hg19UCSC Ensembl
Innerchr7:76035366..76268861hg18UCSC Ensembl
Cytoband7q11.23
Allele length
AssemblyAllele length
hg38233496
hg19233496
hg18233496
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2764008
Supporting Variants
SamplesSW_1165
Known GenesLOC100133091, POMZP3
MethodMerging
AnalysisTwo different algorithms (PennCNV and Birdseye) were applied to detect CNVs. Only congruent CNV events regarding direction of effect that were detected by both algorithms were merged using the outer borders of the event in a first step. In a second step only CNVs that were detected in at least two individuals were merged into a CNVR.
PlatformMerging
Comments
ReferenceVogler_et_al_2010
Pubmed ID21179565
Accession Number(s)essv6990907
Frequency
Sample Size1109
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer