A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6974769



Internal ID9736492
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:33084684..33084916hg38UCSC Ensembl
Outerchr6:33052461..33052693hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38233
hg19233
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731879
Supporting Variants
SamplesSSM029
Known GenesHLA-DPB1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6974769
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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