A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6973658



Internal ID10077864
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:195686739..195687047hg38UCSC Ensembl
Outerchr3:195413610..195413918hg19UCSC Ensembl
Cytoband3q29
Allele length
AssemblyAllele length
hg38309
hg19309
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2726481, esv2726477
Supporting Variants
SamplesSSM029
Known GenesSDHAP2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6973658
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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