A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6972980



Internal ID10078474
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:99251982..99252309hg38UCSC Ensembl
Outerchr2:99868445..99868772hg19UCSC Ensembl
Cytoband2q11.2
Allele length
AssemblyAllele length
hg38328
hg19328
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2720431
Supporting Variants
SamplesSSM029
Known GenesLYG2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6972980
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer