A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6972598



Internal ID9732133
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:184967960..184968223hg38UCSC Ensembl
Outerchr1:184937092..184937355hg19UCSC Ensembl
Cytoband1q25.3
Allele length
AssemblyAllele length
hg38264
hg19264
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2720217
Supporting Variants
SamplesSSM029
Known GenesFAM129A
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6972598
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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