A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6971683



Internal ID10073652
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:54342474..54344576hg38UCSC Ensembl
Outerchr18:51868844..51870946hg19UCSC Ensembl
Cytoband18q21.2
Allele length
AssemblyAllele length
hg382103
hg192103
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2717127
Supporting Variants
SamplesSSM028
Known GenesSTARD6
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6971683
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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