A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6968172



Internal ID9730126
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:248145169..248203170hg38UCSC Ensembl
Outerchr1:248308471..248366472hg19UCSC Ensembl
Cytoband1q44
Allele length
AssemblyAllele length
hg3858002
hg1958002
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2728006, esv2728017
Supporting Variants
SamplesSSM028
Known GenesOR2M2, OR2M3, OR2M5
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6968172
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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