A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6967171



Internal ID9725589
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:77549367..77549471hg38UCSC Ensembl
Outerchr18:75261323..75261427hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg38105
hg19105
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2717460, esv2717388, esv2717463
Supporting Variants
SamplesSSM027
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6967171
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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