A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6964817



Internal ID9637544
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:167250187..167408290hg38UCSC Ensembl
Outerchr6:167663675..167821778hg19UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg38158104
hg19158104
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2733230
Supporting Variants
SamplesSSM001
Known GenesTCP10, TTLL2, UNC93A
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6964817
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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