A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6963951



Internal ID9643513
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:101034835..101036576hg38UCSC Ensembl
Outerchr7:100678116..100679857hg19UCSC Ensembl
Cytoband7q22.1
Allele length
AssemblyAllele length
hg381742
hg191742
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2734921, esv2734914, esv2734922, esv2734918, esv2734920, esv2734888, esv2734913, esv2734919
Supporting Variants
SamplesSSM004
Known GenesMUC17
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6963951
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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