A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6963942



Internal ID9723780
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:163322798..163323255hg38UCSC Ensembl
Outerchr6:163743830..163744287hg19UCSC Ensembl
Cytoband6q26
Allele length
AssemblyAllele length
hg38458
hg19458
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2733112
Supporting Variants
SamplesSSM027
Known GenesPACRG-AS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6963942
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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