A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6963456



Internal ID9722510
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:143284922..143285080hg38UCSC Ensembl
Outerchr5:142664487..142664645hg19UCSC Ensembl
Cytoband5q31.3
Allele length
AssemblyAllele length
hg38159
hg19159
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2730857, esv2730856
Supporting Variants
SamplesSSM027
Known GenesNR3C1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6963456
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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