A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6962397



Internal ID9721555
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:11166755..11167150hg38UCSC Ensembl
Outerchr3:11208441..11208836hg19UCSC Ensembl
Cytoband3p25.3
Allele length
AssemblyAllele length
hg38396
hg19396
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2724908, esv2724892, esv2724895
Supporting Variants
SamplesSSM027
Known GenesHRH1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6962397
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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