A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6960779



Internal ID10063043
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr20:14591178..14593361hg38UCSC Ensembl
Outerchr20:14571824..14574007hg19UCSC Ensembl
Cytoband20p12.1
Allele length
AssemblyAllele length
hg382184
hg192184
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2722209
Supporting Variants
SamplesSSM026
Known GenesMACROD2, MACROD2-IT1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6960779
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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