A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6960578



Internal ID9716176
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:6003064..6003169hg38UCSC Ensembl
Outerchr18:6003063..6003168hg19UCSC Ensembl
Cytoband18p11.31
Allele length
AssemblyAllele length
hg38106
hg19106
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2716727, esv2716728
Supporting Variants
SamplesSSM026
Known GenesL3MBTL4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6960578
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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