A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6960433



Internal ID10062731
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:41233628..41239206hg38UCSC Ensembl
Outerchr17:39389880..39395458hg19UCSC Ensembl
Cytoband17q21.2
Allele length
AssemblyAllele length
hg385579
hg195579
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2715923
Supporting Variants
SamplesSSM026
Known GenesKRTAP9-8
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6960433
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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