A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6959630



Internal ID10062008
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:110481734..110481855hg38UCSC Ensembl
Outerchr13:111134081..111134202hg19UCSC Ensembl
Cytoband13q34
Allele length
AssemblyAllele length
hg38122
hg19122
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2748026, esv2748027
Supporting Variants
SamplesSSM026
Known GenesCOL4A2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6959630
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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