A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6959507



Internal ID9990595
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:170915985..170916426hg38UCSC Ensembl
Outerchr5:170342989..170343430hg19UCSC Ensembl
Cytoband5q35.1
Allele length
AssemblyAllele length
hg38442
hg19442
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731086
Supporting Variants
SamplesSSM004
Known GenesRANBP17
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6959507
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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