A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6956642



Internal ID10065349
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:76699654..76699801hg38UCSC Ensembl
Outerchr5:75995479..75995626hg19UCSC Ensembl
Cytoband5q13.3
Allele length
AssemblyAllele length
hg38148
hg19148
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2730322, esv2730321
Supporting Variants
SamplesSSM026
Known GenesIQGAP2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6956642
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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