A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6955699



Internal ID10064502
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:42796876..42799300hg38UCSC Ensembl
Outerchr3:42838368..42840792hg19UCSC Ensembl
Cytoband3p22.1
Allele length
AssemblyAllele length
hg382425
hg192425
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2725200
Supporting Variants
SamplesSSM026
Known GenesHIGD1A
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6955699
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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