A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6955285



Internal ID9717442
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:54956255..54956320hg38UCSC Ensembl
Outerchr2:55183392..55183457hg19UCSC Ensembl
Cytoband2p16.1
Allele length
AssemblyAllele length
hg3866
hg1966
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2720083, esv2720078, esv2720086
Supporting Variants
SamplesSSM026
Known GenesEML6
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6955285
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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