A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6954477



Internal ID9712142
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:29299794..29300247hg38UCSC Ensembl
Outerchr22:29695784..29696237hg19UCSC Ensembl
Cytoband22q12.2
Allele length
AssemblyAllele length
hg38454
hg19454
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2724123
Supporting Variants
SamplesSSM025
Known GenesEWSR1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6954477
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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