A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6953128



Internal ID9644846
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:108238971..108239740hg38UCSC Ensembl
Outerchr2:108855427..108856196hg19UCSC Ensembl
Cytoband2q12.3
Allele length
AssemblyAllele length
hg38770
hg19770
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2720498, esv2720499
Supporting Variants
SamplesSSM004
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6953128
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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