A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6952879



Internal ID9714446
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:12774861..12775445hg38UCSC Ensembl
Outerchr10:12816860..12817444hg19UCSC Ensembl
Cytoband10p13
Allele length
AssemblyAllele length
hg38585
hg19585
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2733239, esv2733251, esv2733228
Supporting Variants
SamplesSSM025
Known GenesCAMK1D
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6952879
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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