A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6950307



Internal ID9991489
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:23409633..23411362hg38UCSC Ensembl
Outerchr1:23736126..23737855hg19UCSC Ensembl
Cytoband1p36.12
Allele length
AssemblyAllele length
hg381730
hg191730
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745297
Supporting Variants
SamplesSSM004
Known GenesTCEA3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6950307
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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