A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6947974



Internal ID9642838
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:47490315..47490612hg38UCSC Ensembl
Outerchr19:47993572..47993869hg19UCSC Ensembl
Cytoband19q13.32
Allele length
AssemblyAllele length
hg38298
hg19298
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718664
Supporting Variants
SamplesSSM003
Known GenesNAPA, NAPA-AS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6947974
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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