A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6945946



Internal ID9704848
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:79172285..79172496hg38UCSC Ensembl
Outerchr18:76932285..76932496hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg38212
hg19212
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2717624, esv2717497
Supporting Variants
SamplesSSM023
Known GenesATP9B
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6945946
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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