A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6942498



Internal ID10051017
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:99886083..99886431hg38UCSC Ensembl
Outerchr3:99604927..99605275hg19UCSC Ensembl
Cytoband3q12.1
Allele length
AssemblyAllele length
hg38349
hg19349
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2725686
Supporting Variants
SamplesSSM023
Known GenesCMSS1, FILIP1L, MIR548G
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6942498
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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