A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6941262



Internal ID9636154
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:156931614..156932634hg38UCSC Ensembl
Outerchr5:156358625..156359645hg19UCSC Ensembl
Cytoband5q33.3
Allele length
AssemblyAllele length
hg381021
hg191021
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2730953
Supporting Variants
SamplesSSM001
Known GenesTIMD4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6941262
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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