A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6939666



Internal ID9700855
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr8:19461395..19461620hg38UCSC Ensembl
Outerchr8:19318906..19319131hg19UCSC Ensembl
Cytoband8p21.3
Allele length
AssemblyAllele length
hg38226
hg19226
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2736723, esv2736721
Supporting Variants
SamplesSSM022
Known GenesCSGALNACT1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6939666
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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