A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6937708



Internal ID10046362
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:40817248..40817645hg38UCSC Ensembl
Outerchr1:41282920..41283317hg19UCSC Ensembl
Cytoband1p34.2
Allele length
AssemblyAllele length
hg38398
hg19398
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2747408
Supporting Variants
SamplesSSM022
Known GenesKCNQ4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6937708
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer