A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6930457



Internal ID9693361
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:52051647..52052007hg38UCSC Ensembl
Outerchr6:51916445..51916805hg19UCSC Ensembl
Cytoband6p12.2
Allele length
AssemblyAllele length
hg38361
hg19361
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2732078, esv2732076
Supporting Variants
SamplesSSM020
Known GenesPKHD1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6930457
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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