A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6928824



Internal ID9691339
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:52683303..52978643hg38UCSC Ensembl
Outerchr19:53186556..53481896hg19UCSC Ensembl
Cytoband19q13.41
Allele length
AssemblyAllele length
hg38295341
hg19295341
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718787, esv2718786, esv2718796
Supporting Variants
SamplesSSM019
Known GenesZNF28, ZNF320, ZNF321P, ZNF468, ZNF600, ZNF611, ZNF702P, ZNF816, ZNF816-ZNF321P, ZNF83
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6928824
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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