A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6926154



Internal ID9688936
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:48561477..48562020hg38UCSC Ensembl
Outerchr3:48598910..48599453hg19UCSC Ensembl
Cytoband3p21.31
Allele length
AssemblyAllele length
hg38544
hg19544
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2725247
Supporting Variants
SamplesSSM019
Known GenesUCN2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6926154
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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