A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6925617



Internal ID9685314
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr21:44602673..44768119hg38UCSC Ensembl
Outerchr21:46022590..46188034hg19UCSC Ensembl
Cytoband21q22.3
Allele length
AssemblyAllele length
hg38165447
hg19165445
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2723675
Supporting Variants
SamplesSSM018
Known GenesKRTAP10-10, KRTAP10-11, KRTAP10-12, KRTAP10-8, KRTAP10-9, KRTAP12-1, KRTAP12-2, KRTAP12-3, KRTAP12-4, TSPEAR
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6925617
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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