A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6924839



Internal ID9687584
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:17143622..17144023hg38UCSC Ensembl
Outerchr16:17237479..17237880hg19UCSC Ensembl
Cytoband16p12.3
Allele length
AssemblyAllele length
hg38402
hg19402
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2714037, esv2714015, esv2714036
Supporting Variants
SamplesSSM018
Known GenesXYLT1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6924839
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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