A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6924290



Internal ID9686973
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:2358097..2358455hg38UCSC Ensembl
Outerchr12:2467263..2467621hg19UCSC Ensembl
Cytoband12p13.33
Allele length
AssemblyAllele length
hg38359
hg19359
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745410
Supporting Variants
SamplesSSM018
Known GenesCACNA1C
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6924290
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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