A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6921540



Internal ID9987146
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:51738644..51739124hg38UCSC Ensembl
Outerchr3:51772660..51773140hg19UCSC Ensembl
Cytoband3p21.2
Allele length
AssemblyAllele length
hg38481
hg19481
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2725260
Supporting Variants
SamplesSSM003
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6921540
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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