A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6920725



Internal ID9684243
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:17143572..17144170hg38UCSC Ensembl
Outerchr16:17237429..17238027hg19UCSC Ensembl
Cytoband16p12.3
Allele length
AssemblyAllele length
hg38599
hg19599
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2714037, esv2714015, esv2714036
Supporting Variants
SamplesSSM017
Known GenesXYLT1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6920725
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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