A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6920450



Internal ID10030682
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:113336525..113336932hg38UCSC Ensembl
Outerchr13:113990840..113991247hg19UCSC Ensembl
Cytoband13q34
Allele length
AssemblyAllele length
hg38408
hg19408
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2748278
Supporting Variants
SamplesSSM017
Known GenesGRTP1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6920450
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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