A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6917448



Internal ID10027981
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:27608679..27609187hg38UCSC Ensembl
Outerchr1:27935190..27935698hg19UCSC Ensembl
Cytoband1p36.11
Allele length
AssemblyAllele length
hg38509
hg19509
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745741
Supporting Variants
SamplesSSM017
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6917448
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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