A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6914950



Internal ID10026030
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:147243094..147243514hg38UCSC Ensembl
Outerchr5:146622657..146623077hg19UCSC Ensembl
Cytoband5q32
Allele length
AssemblyAllele length
hg38421
hg19421
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2730887
Supporting Variants
SamplesSSM016
Known GenesSTK32A
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6914950
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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