A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6909758



Internal ID10017756
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:12397246..12437135hg38UCSC Ensembl
Outerchr19:12508060..12547949hg19UCSC Ensembl
Cytoband19p13.2
Allele length
AssemblyAllele length
hg3839890
hg1939890
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718194, esv2718192
Supporting Variants
SamplesSSM014
Known GenesZNF443, ZNF799
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6909758
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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